By Wolfsberg Tyra G., Wetterstrand Kris A., Guyer Mark S., Collins Francis S., Baxevanis Andreas D.
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Additional resources for A user's guide to the human genome
The domain was found in both of the databases comprising supplement to nature genetics • september 2002 CDD (Pfam and SMART), as can be seen by looking at the accession numbers in the hit list. To determine which other proteins contain this same HMGbox domain, click on the box labeled Show, right under the graphical view near the top of the page. This will invoke the domain architecture retrieval tool (DART). DART shows functional domains within a protein and, more importantly, other proteins with a similar domain architecture (Fig.
Most of the methods show a 3′ untranslated region, indicated by the heavy, shorter block at the left of the predictions. The Acembly track shows three possible alternative splices in addition to the full-length product shown in the third line of that section, a prediction that agrees with those shown in most of the other tracks. The Genscan track extends off to both the right and the left: GENSCAN can be used to predict multiple genes, and this display implies that the method has been applied in this fashion.
Therefore: • the first line of the above format sets the browser to position 38496887–39496866 on chromosome 22. • the next six ‘browser’ lines change the overall browser display for the Chromosome Band, STS Markers, Gap, Coverage, Known Genes and Human mRNAs tracks. The formatted text must contain the symbolic name for each track rather than the name listed on the web page display. 1. Compared with the default settings (Fig. 1), the Chromosome Band, STS Markers, Gap and Coverage tracks have all been hidden, and Human mRNAs is dense rather than full (Fig.